List Actions: Export sample list
About
Genotyping samples option permits to take genotyping samples from a dataset in a study and sample observations and sub-observations units. The first step is to select the dataset and the process will continue as usual, but filtering based on the dataset selected: instances and variable. As a result of the list creation, the sample is linked with the enumerator of the original dataset.
Datasets
Select 'Actions' > 'Create genotyping samples' option. Plots: Observations is selected as default and all sub-observations datasets are listed.
Select a dataset and Continue
A table with location names filtered based on the dataset selected is displayed, and each row with a check box is selected as default.
Select the location(s) desired and Continue.
In this step, new information needs to be specified:
Variate that defines the number of samples per plot (mandatory): numeric selection variables associated with the dataset selected.
Taken by (optional): All persons associated with the program are listed. The logged user is selected as default and there is an option to leave the field empty.
Sampling date (optional)
And 'Save' option is enabled as default.
Save
Select the parent folder where the list will be saved, or you can create a new child folder under the Sample lists folder.
Fill List Details up List Name (mandatory), Description, and Notes.
Save
Sample List
A successful message is displayed: "Samples list created successfully!"
And the list is displayed at the level of other lists in the study
Sample list Actions: Export list
Export Sample list, the list is exported in CSV format
Samples in Observations tab
Ince the sample list is saved successfully, a new column appears in the Observations tab: SAMPLES with the sum of samples per <obs-unit>.
Click on a sample number link.
Sample details popup is displayed.
PLATE_ID, WELL will be populated once the user has imported the Plate information (See https://ibplatform.atlassian.net/wiki/spaces/BMS/pages/2446066259/v19+Samples+Lists#Import-List )
GENOTYPING_DATASET will be populated once the user has imported a genotyping dataset involving the samples (See https://ibplatform.atlassian.net/wiki/spaces/BMS/pages/2446066667/v19+Low+Density#Genotype-Data-Sets )